{
  "url": "https://mfuegger.github.io/",
  "name": "Matthias Függer",
  "alternate_names": [
    "Matthias Fugger"
  ],
  "role": "Research Director, CNRS",
  "affiliation_label": "CNRS / LMF",
  "employer": {
    "name": "CNRS",
    "url": "https://www.cnrs.fr/"
  },
  "description": "My current focus is the systematic engineering of robust microbial systems, with applications in bioproduction, diagnosis, and medical treatment. This includes distributed computation in bacterial systems, particularly communication and coordination between cells. My approach combines experiments, modeling, numerical simulation, AI, and mathematical analysis.",
  "affiliations": [
    {
      "name": "Laboratoire Méthodes Formelles",
      "url": "https://lmf.cnrs.fr/"
    },
    {
      "name": "Université Paris-Saclay",
      "url": "https://www.universite-paris-saclay.fr/"
    },
    {
      "name": "CNRS",
      "url": "https://www.cnrs.fr/"
    },
    {
      "name": "ENS Paris-Saclay",
      "url": "https://ens-paris-saclay.fr/"
    }
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  "email": "mfuegger@lmf.cnrs.fr",
  "portrait": "assets/portrait-matthias2-16b01fc5.jpg",
  "links": [
    {
      "label": "Publications",
      "url": "publications.html"
    },
    {
      "label": "Google Scholar",
      "url": "https://scholar.google.com/citations?user=MoWte0cAAAAJ&hl=en"
    },
    {
      "label": "ORCID",
      "url": "https://orcid.org/0000-0001-5765-0301"
    },
    {
      "label": "GitHub",
      "url": "https://github.com/mfuegger"
    },
    {
      "label": "Institutional profile",
      "url": "https://home.lmf.cnrs.fr/MatthiasFuegger/"
    }
  ],
  "research": {
    "group_context": "at LMF",
    "description": "I also study distributed algorithms and digital circuits, including consensus in dynamic networks, timing models, and fault tolerance.",
    "groups": [
      {
        "role": "co-PI",
        "name": "Cellular Computing Team",
        "url": "https://www.cellularcomputing.group/"
      },
      {
        "role": "head",
        "name": "Distributed Computing Group",
        "url": "https://lmf.cnrs.fr/Research/CDS"
      }
    ],
    "description_links": [
      {
        "label": "distributed computation in bacterial systems",
        "url": "https://www.dreamy.run/"
      }
    ]
  },
  "software": {
    "name": "MobsPy",
    "url": "https://github.com/ROBACON/mobspy",
    "description": "A Python-based language for modeling biochemical reaction networks using meta-species and meta-reactions.",
    "collaborators": "With Fabricio Cravo, Gayathri Prakash, and Thomas Nowak.",
    "paper_url": "https://doi.org/10.1371/journal.pcbi.1013024"
  },
  "habilitation": {
    "title": "Computing at the border of abstractions: the power of timed, non-binary, distributed circuits",
    "institution": "Université Paris-Saclay",
    "year": 2022,
    "pdf_url": "habil/thesis.pdf",
    "details_url": "habil/"
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  "teaching": {
    "courses": [
      {
        "year": 2026,
        "name": "Computational Bioengineering",
        "details": "ENS Paris-Saclay · With Thomas Nowak.",
        "url": "https://compbioeng.biodis.co"
      },
      {
        "year": 2026,
        "name": "Initiation à la recherche",
        "details": "ENS Paris-Saclay."
      },
      {
        "year": 2026,
        "term": "Summer",
        "name": "Computational Bioengineering",
        "details": "TU Wien · Invited professor, Informatics Doctoral School.",
        "url": "https://tiss.tuwien.ac.at/course/courseDetails.xhtml?semester=2026S&courseNr=199035"
      },
      {
        "year": 2025,
        "term": "Winter",
        "name": "Computational Bioengineering",
        "details": "With Thomas Nowak and Mariapia D’Urso.",
        "url": "https://compbioeng.biodis.co",
        "recording": {
          "title": "Full lecture series",
          "url": "https://www.youtube.com/playlist?list=PLLGPEjQmmA7DSruH84oHIanAXo44Bf4sI",
          "thumbnail": "assets/course-compbioeng-2025.jpg",
          "width": 1280,
          "height": 720
        }
      },
      {
        "year": 2025,
        "term": "Winter",
        "name": "Initiation à la recherche",
        "details": "ENS Paris-Saclay · With Thomas Nowak."
      },
      {
        "year": 2024,
        "term": "Winter",
        "name": "Computational Bioengineering",
        "details": "With Thomas Nowak and Mariapia D’Urso.",
        "url": "https://compbioeng.biodis.co"
      },
      {
        "year": 2024,
        "term": "Winter",
        "name": "Initiation à la recherche",
        "details": "Distributed synthetic microbiology, 2h · ENS Paris-Saclay · With Thomas Nowak.",
        "url": "https://wikimpri.dptinfo.ens-cachan.fr/doku.php?id=cours:c-1-36"
      },
      {
        "year": 2022,
        "term": "Winter",
        "name": "Initiation à la recherche",
        "details": "Distributed synthetic microbiology, 2h · ENS Paris-Saclay · With Thomas Nowak."
      },
      {
        "year": 2021,
        "term": "Winter",
        "name": "Initiation à la recherche",
        "details": "Distributed synthetic microbiology, 2h · ENS Paris-Saclay."
      },
      {
        "year": 2021,
        "term": "Winter",
        "name": "Natural algorithms",
        "details": "With Thomas Nowak."
      },
      {
        "year": 2021,
        "term": "Winter",
        "name": "Metastability-containing Synchronization Circuits",
        "details": "CISPA, Germany · With Christoph Lenzen, Danny Dolev, Moti Medina, Ian W. Jones, and Johannes Bund.",
        "url": "https://cms.cispa.saarland/mcsc/"
      },
      {
        "year": 2021,
        "term": "Summer",
        "name": "Clock Synchronization and Adversarial Fault Tolerance",
        "details": "MSc level · Remote lecture, 4h · MPI-INF · With Christoph Lenzen and Danny Dolev.",
        "url": "https://www.mpi-inf.mpg.de/departments/algorithms-complexity/teaching/summer21/clock-synchronization-and-adversarial-fault-tolerance"
      },
      {
        "year": 2020,
        "term": "Winter",
        "name": "Initiation à la recherche",
        "details": "Distributed synthetic microbiology, 2h · ENS Paris-Saclay."
      },
      {
        "year": 2020,
        "term": "Winter",
        "name": "How To Clock Your Computer",
        "details": "MSc level · Remote lecture, 4h · MPI-INF · With Christoph Lenzen, Moti Medina, Andreas Steininger, Danny Dolev, Ian Jones, and Milos Krstic.",
        "url": "https://www.mpi-inf.mpg.de/departments/algorithms-complexity/teaching/winter20/how-to-clock-your-computer"
      },
      {
        "year": 2019,
        "term": "Winter",
        "name": "Initiation à la recherche",
        "details": "Distributed synthetic microbiology, 2h · ENS Paris-Saclay."
      },
      {
        "year": 2019,
        "term": "Winter",
        "name": "Distributed Computing with Bacteria",
        "details": "Guest lecture · MPI-INF."
      },
      {
        "year": 2018,
        "term": "Winter",
        "name": "Initiation à la recherche",
        "details": "Distributed Biology, 2h · ENS Paris-Saclay."
      },
      {
        "year": 2018,
        "term": "Winter",
        "name": "Link Reversal Algorithms",
        "details": "Guest lecture · MPI-INF."
      },
      {
        "year": 2017,
        "term": "Winter",
        "name": "Initiation à la recherche",
        "details": "Opinion Dynamics, 2h · ENS Paris-Saclay."
      },
      {
        "year": 2015,
        "term": "Summer",
        "name": "Beyond Classical Circuit Design",
        "details": "MPI-INF.",
        "url": "http://resources.mpi-inf.mpg.de/departments/d1/teaching/ss15/ChipDesign/"
      }
    ],
    "channel": {
      "name": "Cellular Computing Team",
      "url": "https://www.youtube.com/@cellularcomputingteam"
    }
  },
  "contact": {
    "invitation": "For research inquiries and opportunities for internships, PhD studies, or postdoctoral research, please contact me.",
    "address": [
      "Laboratoire Méthodes Formelles",
      "ENS Paris-Saclay",
      "4 avenue des Sciences",
      "91190 Gif-sur-Yvette, France"
    ]
  },
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    "institution": "TU Wien",
    "details_url": "https://repositum.tuwien.at/handle/20.500.12708/14747"
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      "title": "Vibe-Formalizing our TCS Paper in Lean",
      "year": 2026,
      "description": "Formalizing a theoretical computer science paper in Lean.",
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      "year": 2022,
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      "title": "Analysis of On-Chip Fault-Tolerant Distributed Algorithms",
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